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Applied Maths bionumerics software version 2.5
Bionumerics Software Version 2.5, supplied by Applied Maths, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/bionumerics+software+version+2%2E5/bionumerics+software/pm32601953-61-5-9
Average 90 stars, based on 1 article reviews
bionumerics software version 2.5 - by Bioz Stars, 2026-09
90/100 stars

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Blocking Assay:

Article Title: Isolation, Identification, and Screening of Lactic Acid Bacteria with Probiotic Potential in Silage of Different Species of Forage Plants, Cocoa Beans, and Artisanal Salami.
Article Snippet: The objective of this study was to isolate and characterize lactic acid bacteria with probiotic potential in silages of different species of forage plants, cocoa beans, and artisanal salami.. The obtained isolates were submitted to the following evaluations: (i) screening for tolerance to pH 2 and bile salts, (ii) genotypic identification of isolates, (iii) survival in simulated gastric and pancreatic conditions, (iv) antimicrobial activity, (v) antibiotic susceptibility and safety, and (vi) properties associated with adhesion capacity.. A total of 82 isolates were obtained and were screened for pH 2.0 tolerance and capacity to growth in the presence of bile salts (1.0 and 2.0%).

Article Title: Characteristics of Carbapenem-Resistant Enterobacteriaceae in Ready-to-Eat Vegetables in China
Article Snippet: The PFGE patterns were analyzed with BioNumerics software version 2.5 (Applied Maths) to describe the relationships of the test strains.

Article Title: Production of H(2) from cellulose by rumen microorganisms: effects of inocula pre-treatment and enzymatic hydrolysis.
Article Snippet: H2 production from cellulose, using rumen fluid as the inoculum, has been investigated in batch experiments.. Methanogenic archaea were inhibited by acid pre-treatment, which also inhibited cellulolytic microorganisms, and in consequence, the conversion of cellulose to H2.. Positive results were observed only with the addition of cellulase.

Article Title: Application of Lactobacillus plantarum Lb9 as starter culture in caper berry fermentation
Article Snippet: Fermentation of caper berries is a traditional process relying on the indigenous microbiota.. In this study, the application of Lactobacillus plantarum Lb9 isolated from spontaneous caper berry fermentation as starter culture was evaluated by means of culture-dependent and independent methods.. The results obtained here indicated that L. plantarum Lb9 was able to carry on an accelerated lactic acid fermentation of caper berries, dominating the background microbiota present in the raw material until the end of fermentation even when fermentation broth was added with high salt concentration.

Article Title: Vaccine-driven serotype-rearrangement is seen with latency in clinical isolates: Comparison of carried and clinical pneumococcal isolates from the same time period in Hungary.
Article Snippet: https://doi.org/10.1016/j.vaccine.2018.11.026 0264-410X/ 2018 Elsevier Ltd. All rights reserved.. Abbreviations: DCC, day-care centre; PPV, pneumococcal polysaccharide vaccine; PCV, pneumococcal conjugated vaccine; PFGE, pulsed-field gel electrophoresis; MLST, multilocus sequence typing; MIC, minimum inhibitory concentration; MLSB, macrolide, lincosamide and streptogramin B resistance phenotype; M type, macrolide resistance phenotype; NVT, non-vaccine type; NT, non-typeable.. ⇑ Corresponding author.

Article Title: Effect of phenol on the nitrogen removal performance and microbial community structure and composition of an anammox reactor.
Article Snippet: DGGE patterns were analyzed using the BioNumerics software version 2.5 (Applied Maths, Austin, TX, USA).

Article Title: Co-carriage of Staphylococcus aureus , Streptococcus pneumoniae , Haemophilus influenzae and Moraxella catarrhalis among three different age categories of children in Hungary
Article Snippet: PFGE profiles were analysed with the BioNumerics software version 2.5 (Applied Maths, Sint-Martens-Latem, Belgium), applying unweighted pair group method using arithmetic averages (UPGMA) and the different bands similarity coefficient, with a band position tolerance of 2.0%.

Software:

Article Title: Isolation, Identification, and Screening of Lactic Acid Bacteria with Probiotic Potential in Silage of Different Species of Forage Plants, Cocoa Beans, and Artisanal Salami.
Article Snippet: The objective of this study was to isolate and characterize lactic acid bacteria with probiotic potential in silages of different species of forage plants, cocoa beans, and artisanal salami.. The obtained isolates were submitted to the following evaluations: (i) screening for tolerance to pH 2 and bile salts, (ii) genotypic identification of isolates, (iii) survival in simulated gastric and pancreatic conditions, (iv) antimicrobial activity, (v) antibiotic susceptibility and safety, and (vi) properties associated with adhesion capacity.. A total of 82 isolates were obtained and were screened for pH 2.0 tolerance and capacity to growth in the presence of bile salts (1.0 and 2.0%).

Article Title: Characteristics of Carbapenem-Resistant Enterobacteriaceae in Ready-to-Eat Vegetables in China
Article Snippet: The PFGE patterns were analyzed with BioNumerics software version 2.5 (Applied Maths) to describe the relationships of the test strains.

Article Title: Production of H(2) from cellulose by rumen microorganisms: effects of inocula pre-treatment and enzymatic hydrolysis.
Article Snippet: H2 production from cellulose, using rumen fluid as the inoculum, has been investigated in batch experiments.. Methanogenic archaea were inhibited by acid pre-treatment, which also inhibited cellulolytic microorganisms, and in consequence, the conversion of cellulose to H2.. Positive results were observed only with the addition of cellulase.

Article Title: Application of Lactobacillus plantarum Lb9 as starter culture in caper berry fermentation
Article Snippet: Fermentation of caper berries is a traditional process relying on the indigenous microbiota.. In this study, the application of Lactobacillus plantarum Lb9 isolated from spontaneous caper berry fermentation as starter culture was evaluated by means of culture-dependent and independent methods.. The results obtained here indicated that L. plantarum Lb9 was able to carry on an accelerated lactic acid fermentation of caper berries, dominating the background microbiota present in the raw material until the end of fermentation even when fermentation broth was added with high salt concentration.

Article Title: Vaccine-driven serotype-rearrangement is seen with latency in clinical isolates: Comparison of carried and clinical pneumococcal isolates from the same time period in Hungary.
Article Snippet: https://doi.org/10.1016/j.vaccine.2018.11.026 0264-410X/ 2018 Elsevier Ltd. All rights reserved.. Abbreviations: DCC, day-care centre; PPV, pneumococcal polysaccharide vaccine; PCV, pneumococcal conjugated vaccine; PFGE, pulsed-field gel electrophoresis; MLST, multilocus sequence typing; MIC, minimum inhibitory concentration; MLSB, macrolide, lincosamide and streptogramin B resistance phenotype; M type, macrolide resistance phenotype; NVT, non-vaccine type; NT, non-typeable.. ⇑ Corresponding author.

Article Title: Effect of phenol on the nitrogen removal performance and microbial community structure and composition of an anammox reactor.
Article Snippet: DGGE patterns were analyzed using the BioNumerics software version 2.5 (Applied Maths, Austin, TX, USA).

Article Title: Co-carriage of Staphylococcus aureus , Streptococcus pneumoniae , Haemophilus influenzae and Moraxella catarrhalis among three different age categories of children in Hungary
Article Snippet: PFGE profiles were analysed with the BioNumerics software version 2.5 (Applied Maths, Sint-Martens-Latem, Belgium), applying unweighted pair group method using arithmetic averages (UPGMA) and the different bands similarity coefficient, with a band position tolerance of 2.0%.

Denaturing Gradient Gel Electrophoresis:

Article Title: Isolation, Identification, and Screening of Lactic Acid Bacteria with Probiotic Potential in Silage of Different Species of Forage Plants, Cocoa Beans, and Artisanal Salami.
Article Snippet: The objective of this study was to isolate and characterize lactic acid bacteria with probiotic potential in silages of different species of forage plants, cocoa beans, and artisanal salami.. The obtained isolates were submitted to the following evaluations: (i) screening for tolerance to pH 2 and bile salts, (ii) genotypic identification of isolates, (iii) survival in simulated gastric and pancreatic conditions, (iv) antimicrobial activity, (v) antibiotic susceptibility and safety, and (vi) properties associated with adhesion capacity.. A total of 82 isolates were obtained and were screened for pH 2.0 tolerance and capacity to growth in the presence of bile salts (1.0 and 2.0%).

Article Title: Characteristics of Carbapenem-Resistant Enterobacteriaceae in Ready-to-Eat Vegetables in China
Article Snippet: The PFGE patterns were analyzed with BioNumerics software version 2.5 (Applied Maths) to describe the relationships of the test strains.

Article Title: Production of H(2) from cellulose by rumen microorganisms: effects of inocula pre-treatment and enzymatic hydrolysis.
Article Snippet: H2 production from cellulose, using rumen fluid as the inoculum, has been investigated in batch experiments.. Methanogenic archaea were inhibited by acid pre-treatment, which also inhibited cellulolytic microorganisms, and in consequence, the conversion of cellulose to H2.. Positive results were observed only with the addition of cellulase.

Article Title: Application of Lactobacillus plantarum Lb9 as starter culture in caper berry fermentation
Article Snippet: Fermentation of caper berries is a traditional process relying on the indigenous microbiota.. In this study, the application of Lactobacillus plantarum Lb9 isolated from spontaneous caper berry fermentation as starter culture was evaluated by means of culture-dependent and independent methods.. The results obtained here indicated that L. plantarum Lb9 was able to carry on an accelerated lactic acid fermentation of caper berries, dominating the background microbiota present in the raw material until the end of fermentation even when fermentation broth was added with high salt concentration.

Article Title: Vaccine-driven serotype-rearrangement is seen with latency in clinical isolates: Comparison of carried and clinical pneumococcal isolates from the same time period in Hungary.
Article Snippet: https://doi.org/10.1016/j.vaccine.2018.11.026 0264-410X/ 2018 Elsevier Ltd. All rights reserved.. Abbreviations: DCC, day-care centre; PPV, pneumococcal polysaccharide vaccine; PCV, pneumococcal conjugated vaccine; PFGE, pulsed-field gel electrophoresis; MLST, multilocus sequence typing; MIC, minimum inhibitory concentration; MLSB, macrolide, lincosamide and streptogramin B resistance phenotype; M type, macrolide resistance phenotype; NVT, non-vaccine type; NT, non-typeable.. ⇑ Corresponding author.

Article Title: Effect of phenol on the nitrogen removal performance and microbial community structure and composition of an anammox reactor.
Article Snippet: DGGE patterns were analyzed using the BioNumerics software version 2.5 (Applied Maths, Austin, TX, USA).

Article Title: Co-carriage of Staphylococcus aureus , Streptococcus pneumoniae , Haemophilus influenzae and Moraxella catarrhalis among three different age categories of children in Hungary
Article Snippet: PFGE profiles were analysed with the BioNumerics software version 2.5 (Applied Maths, Sint-Martens-Latem, Belgium), applying unweighted pair group method using arithmetic averages (UPGMA) and the different bands similarity coefficient, with a band position tolerance of 2.0%.



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